Effect Size for ANOVA

There are two common measures of effect size used for ANOVA and contrasts: one based on Cohen’s d (see Effect Size for Samples) and the other based on the correlation coefficient r (see Basic Concepts of Correlation). We will cover the first type here and the second type in Other Measures of Effect Size for ANOVA.

For pairwise contrasts we can use Cohen’s measure of effect size, namely

Cohen's d ANOVAwhich can be implemented using Hodges measure of effect size, namely

Hodges effect size ANOVA

This can be extended to the comparison of more complicated contrasts. E.g. for the null hypothesis H0: \mu_1 = \frac{\mu_2 + \mu_3}{2} we can use  the following value for g

image1291

The interpretation of g is the same as for a comparison of two means.

This measure of effect size can be extended to the omnibus ANOVA. The following measure is called the root-mean-square standardized effect (RMSSE).

RMSSE effect size

In Excel, this can be calculated as

=SQRT(DEVSQ(R1) / ((k–1)*R2)

where R1 is the array of group means and R2 is a cell that contains MSE. The group means differ on average by d standard deviations from the grand mean. E.g. if d = .8, then the group means differ by 80% of a standard deviation from the grand mean, which is a sizable difference.

Observation: When no better information is available, a rule of thumb is that d = .10 is a small effect, .25 is a medium effect and .40 or more is a large effect. To calculate power you can employ G*Power (available for free on the Internet) using the above values of d. You can also use the capabilities described in Power for One-way ANOVA.

Example 1: Calculate the effect size d (RMSSE) for the ANOVA in Example 2 of Basic Concepts for ANOVA.

Using the Excel formula given above, d = SQRT(DEVSQ(I7:I10)/(H15*I16)) = .618 (referring to Figure 2 of Basic Concepts for ANOVA), which is quite a high value.

Example 2: Calculate the effect size d (RMSSE) for the ANOVA in Example 3 of Basic Concepts for ANOVA using the One Factor ANOVA supplemental analysis tool.

Figure 1 from Confidence Interval for ANOVA displays the output from the Real Statistics One Factor ANOVA analysis tool used to perform this analysis. This figure is replicated as follows:

Real Statistics ANOVA tool

Figure 1 – Effect size from Real Statistics ANOVA data analysis tool

We can see from Figure 1 that the RMSSE effect size is 0.597509 (cell M14). The figure also shows the omega square effect size measurement (cell N14) which is explained in Other Measures of Effect Size for ANOVA).

Observation: Another related measure of effect size is

image7324

where d_j^2 is as described above. Thus, when all the groups are equal in size m, we have

image7325

We will use this measure of effect size when we discuss power and sample size requirements (see Power for One-way ANOVA).

Example 3: Calculate the effect size d for the contrast in Example 4 of Planned Comparisons for ANOVA.

Figure 2 replicates Figure 7 from Planned Comparisons for ANOVA and shows the output from the Real Statistics Contrast data analysis tool. In particular, Cohen’s d (cell V39) = ABS(T36)/N39 = 0.39.

ANOVA contrasts effect size

Figure 2 – Effect size from Real Statistics Contrast data analysis tool

When you select the Contrast tool you will be presented with the dialog box shown in Figure 3. You need to select the type of alpha correction that you want, namely no experiment-wise correction, the Bonferroni correction or the Dunn/Sidák correction (as explained in Planned Comparisons). In any case you set the alpha value to be the experiment-wise value (defaulting as usual to .05). You also need to make sure the Independent type of contrast is selected (the default).

Note too that the contrast output that results from the tool will not contain any contrasts. You need to fill in the desired contrasts directly in the output (e.g. for Example 3 you need to fill in the range O32:O35 in Figure 2 with the contrasts you desire).

dialog-box-contrasts

Figure 3 – Dialog box for Contrasts in data analysis tool

14 Responses to Effect Size for ANOVA

  1. Jose says:

    Dear Professor,

    The “RMSSE” is the same “Steiger’s ψ”?
    I find this effect here: http://www.biochemia-medica.com/2016/2/150
    Say is equal, but I can do some mistake.

    Thanks
    José

    • Charles says:

      Jose,
      I am not familiar with the term Steiger’s ψ, but from the little research I have just done it does seem identical to RMSSE.
      Charles

  2. Mia says:

    Hello, I am trying to figure out how to calculate effect size after conducting a Welch’s ANOVA? Which numbers should I use for the formula? I have found out that for regular ANOVA I should use sum of squares between groups and total sum of squares but Welch’s ANOVA does not contain those values.

    Best regards,
    Mia

  3. Dear Dr. Zaionts,

    This is Gerardo Ardila Duarte. First of all, I would like to apologise again because maybe you did not understand my last email. I would like you to know that my native language is not English but Spanish, and I hardly ever write in English.
    Now let me tell you what I would like to know. In the university I work for in the field of research, I ask students to make a sample pilot which must be at random and whose size must be five as a mimimum. The main purpose of this for me is to check what the sampling error is and based on it, I do the calculations of the size of the sample. I would like to know what your opinion is about my work. I mean, is this size advisable for the sample pilot? Or would you suggest me to take a different size instead? What procedure would you recommend to me?
    I would really appreciate your valuable comments and suggestions.
    Cordially yours,
    GAD

    • Charles says:

      Since the sample is so small, I am not sure what you will learn from the sampling error. I can think of a lot of reasons for doing a small pilot: experience in creating the sample, testing any questionnaires, checking whether the procedures used work in the real world, etc. But you would need a larger sample to really check anything related to the mathematical part of the design.

      If your goals are of the type listed above, then even a sample of size 5 could be appropriate, but for more meaningful statistical results you would usually need a bigger sample. The actual sample size depends on the specific test you are planning to use and the effect size you need to detect with your analysis. These topics are reviewed in a number of places on the website related to Sample Size Requirements. You can enter these words in the Search box and read more about this topic.

      Charles

  4. Dr. good afternoon, for research on, to determine the sampling error I ask students a pilot minimum five size test, not whether it is doing correctly, I have done as tables student and the problems that I see they are of minimum size five, there is a criterion that I report that the sample size should I use for a pilot ?, is that the calculation of the size of the pilot is not required, just want to know who would use size for a pilot, and not even commit a serious error in determining the sample size, I am very grateful to its magnificent page.
    Thanks a lot

    • Charles says:

      Gerardo,
      Sorry, but I don’t understand your question (probably since English is not your native language). A key question for you is “what is the objective of the pilot?” Depending on your answer perhaps the sample size is not important.
      Charles

    • Excusme Dr. english is not my lenguaje.

      Dr. good afternoon, in order to doing research, and determine the sample size, I ask students a minimum pilot five size test, in order to determine the sampling error and/or effect size, I am not sure whether it is doing correctly. Do you know There is a criterion that I report that the sample size should I use for a pilot ?
      Thanks a lot

      • Charles says:

        Gerard,
        I know that it can be difficult to express yourself in another language (I need to do this everyday), but unfortunately I don’t understand your question well enough to be able to answer it.
        Charles

      • Dear Dr. Zaionts,

        This is Gerardo Ardila Duarte. First of all, I would like to apologise again because maybe you did not understand my last email. I would like you to know that my native language is not English but Spanish, and I hardly ever write in English.
        Now let me tell you what I would like to know. In the university I work for in the field of research, I ask students to make a sample pilot which must be at random and whose size must be five as a mimimum. The main purpose of this for me is to check what the sampling error is and based on it, I do the calculations of the size of the sample. I would like to know what your opinion is about my work. I mean, is this size advisable for the sample pilot? Or would you suggest me to take a different size instead? What procedure would you recommend to me?
        I would really appreciate your valuable comments and suggestions.
        Cordially yours,
        GAD

  5. Colin says:

    Sir

    This function “=SQRT(DEVSQ(R1) / ((k–1)*R2)” only works for all the sample sizes are equal. Would you give us another function for the sample sizes are different?

    Colin

Leave a Reply

Your email address will not be published. Required fields are marked *