# ANOVA with more than Two Factors

Excel doesn’t provide tools for ANOVA with more than two factors. On this webpage we show how to construct such tools by extending the analysis provided in the previous sections. See Real Statistics Support for Three Factor ANOVA for how perform the same sort of analysis using the Real Statistics Three Factor ANOVA data analysis tool.

Alternatively, see ANOVA using Regression for how to perform ANOVA with any number of factors using regression (either using the standard Excel Regression data analysis tool or the Real Statistics Linear Regression data analysis tool).

We begin by extending the definitions from Two Factor ANOVA with Replication to three factors.

Definition 1: Using the terminology of Definition 1 of Two Factor ANOVA with Replication (where we use a and b instead of r and c), define

As before, we can also define the between groups terms. This time there are four types:

And similarly for SSBetAC, dfBetAC, SSBetBC, dfBetBC,. There is also the following version:

As usual, we can define the error terms:

Property 1:

Proof: The proof is similar to the proof of Property 1 of Two Factor ANOVA with Replication.

Property 2:

Similar properties hold for the between AC and BC terms. We also have the following properties about the between ABC term:

Property 3: If a sample is made as described in Definition 1 with the xijkl independently and normally distributed and with all $\sigma^2_{i.}$ (or $\sigma^2_{.j}$) equal, then

Theorem 1: Suppose a sample is made as described in Definition 1, with the xijk independently and normally distributed.

If all μi are equal and all $\sigma^2_{i}$ are equal then

If all μj are equal and all $\sigma^2_{j}$ are equal then

Also, under certain circumstances,

Proof: The result follows from Property 1 and Theorem 1 of F Distribution.

Property 4:

Here terms like (βγ)jk2 are not a product of a beta and gamma term squared. Instead such as term refers to a single parameter named (βγ)jk which is squared.

Observation: We use the following tests:

Recall that the assumptions for using these tests are:

• All samples are drawn from normally distributed populations
• All populations have a common variance
• All samples are drawn independently from each other
• Within each sample, the observations are sampled randomly and independently of each other

We now show how to conduct the above tests in Excel. Excel doesn’t have a three factor ANOVA data analysis tool, and so we will need to carry out the analysis using Excel formulas.

Example 1: An Italian research psychologist decides to conduct an experiment to understand the ability of subjects to perform simple tasks when instructed in Italian. She creates 8 sample groups, each with 12 subjects. The three factors are: gender (male/female)  of the subject, nationality of the subject (Italian/foreign) and whether the subject performs the task seated or lying down (Seated/Prone). Each participant is given a test to measure their ability to perform the required tasks, with the scores recorded in the table shown in Figure 16.19. The psychologist wants to know if there are any significant differences between the groups.

Figure 1 – Data for Example 1

We begin by constructing the tables shown in Figure 2.

Figure 2 – Counts and means for Example 1

Now using the information in Figure 1 and 2, we can construct the ANOVA analysis as shown in Figure 3.

Figure 3 – ANOVA for Example 1

We conclude there are significant differences between the nationalities, but no significant differences between the genders or positions. There are also significant interactions between gender and position as well as between all the factors.

### 78 Responses to ANOVA with more than Two Factors

1. Basappa N Katagi says:

please give advice how to form annova table

• Charles says:

Please be more specific since the referenced webpage gives an example.
Charles

2. Lake Smith says:

This is an excellent tutorial.

However, I am confused about how the counts are derived and what they mean for. (Y4:Y17) and (S3:V4).

I would greatly appreciate an explanation.

Thanks

• Lake Smith says:

Sorry about the comment. It appears that the counts are derived from m, a, b, c, the number of levels, and the number of participants in each group. I’m rusty on anova calculations, but this tutorial helps a lot 🙂

• Charles says:

No problem. You are correct that the counts are derived from m, a, b, etc. Feel free to comment, even about simple things. It is better to ask questions to clarify things if necessary.
Charles

3. andy says:

can we use the 3-ways anova for non replication treatment??

• Charles says:

Andy,
Sorry, not at present.
Charles

4. max says:

can you guide me on how to obtain the count data? especially count for AB bet, BC bet and so on.
I am trying to do a three way anova and my a, b, and c factors each has 2, 3 and 4 variables respectively and 300 sample size per row. I can’t seem to get through on how to get the count data. your help is very much appreciated. thanks alot.

• Charles says:

Max,

If I understand your question correctly, a = 2, b = 3, c = 4 and m = 300. This would mean that the total sample has size n = abcm = 7200. If this number is too high, then probably the m value is lower.

Assuming the above is correct, dfBetAB = dfA + dfB + dfAB = (a-1) + (b-1) + (a-1)(b-1) = 1+2+2 = 5.

Charles

5. Stanly Jocson says:

I have a question.
Why is the count in T in figure 3 is 1?

• Charles says:

Stanly,
As you can see in the Formulas for SS column in Figure 3 each DEVSQ formula is multiplied by a count value (e.g. for SSA this is Y6 which is equal to 48). For SST you don’t need to multiple the DEVSQ formula by anything (or equivalently you multiply it by 1).
Charles

6. linda says:

please i need an explanation on finding the counts

• Charles says:

Linda,

The count for A is calculated via the formula =S4*U4*V4
B via =S4*T4*V4
C via =S4*T4*U4
AB Bet via =S4*V4
AC Bet via =S4*U4
BC Bet via =S4*T4
ABC Bet via =S4

Charles

7. Steve says:

Why is the denominator when calculating F always between(within)? Would the calculations change at all if two of the factors were random? If so, how? Thanks for the explanations.

8. Ulfa says:

Dear charles,
I still confuse to get anova three way table by using excel. I have no idea to calculate p-value and Fcrit. Could you give some explanation Charles?
Thank you

• Charles says:

The explanation can be found in Figure 3. Perhaps, you can tell me which formulas in that figure are not clear.
Charles

9. Ilankumaran P says:

How AA9, AA11, AA13 is the value 3? Could you pls explain, Sir?

• Charles says:

I’ll explain AA9, the others are similar. dfAB-Bet can be calculated as ab-1 2*2-1 or as dfA+dfB+dfAB = 1+1+1 = 3.
Charles

• Ilankumaran P says:

Thank you! Your tutorial is a great help to my work.

10. icell says:

hello,
i tried using 3 factor anova and because i have 12 conditions my ‘within’ & ‘df’ cell is zero.so all of my f crit, f and p values are not defined. how do i fix this?

also i am not sure how to interpret the results of 3 factor anova, for example which factor has the significant effect? and so on. is there a hand out i can read more on the interpretation of the 3 way anova results because i can;t seem to be able to find anything online.

thanks
icell

• Charles says:

icell,
If all the values are zero, it probably means that your sample is too small.
The interpretation of the results of three factor anova is quite similar to that of two factor anova, except that it is more complicated since you not only have an extra factor, but you have three more interactions. For Example 1 on the referenced webpage, there is an explanation as to which factors have a significant effect (as always you just need to see if the p-value for that factor is less than alpha).
Charles

11. Kiran says:

Respected sir,
Kindly advice me to solve three factor analysis arranged in split plot design i.e.,
Main plot : First factor- three levels of irrigation (3)
Subplot: Factorial combinations of fertilizer and time application (3×2)
Second factor – three levels of fertilizer (3)
Third factor – two levels of time of application (2)
WAITING FOR U RESPONSE

• Charles says:

Kiran,
It is not so hard to modify the three factor ANOVA design described on the referenced webpage for split plot design, but I haven’t done this yet. I hope to get to this in one of the next few releases. Stay tuned.
Charles

12. Rebecca says:

Hi!

I have a Three-Way Within-Subjects ANOVA. Independent Variable 1 has 2 levels, Independent Variable 2 has 2 levels, and Independent Variable 3 has 3 levels. I have 4 subjects, who went through all the 12 conditions.

My question is that I have drawn up the ANOVA table in excel as followed from your website, and I found that the 3 main effects, 3 two-way interaction effects, 1 three-way interaction effect all share the same error value, which is the Error(Within). But isn’t a Repeated Measures table supposed to have individual Errors for each effect, just like the Two-way Within Subjects ANOVA table drawn on your website?

Please enlighten me on this, thank you!

• Charles says:

Rebecca,
The Three Factor ANOVA shown on the website does not deal with repeated measures. In order to handle a three factor repeated measures ANOVA you need a four factor model which extends the two factor repeated measures ANOVA described on the website. Since this model is complicated to calculate and even more complicated to interpret, I thought that at least for now it was better not to include on the website. As you said, this model would need a separate error term for each effect.
Charles

13. igbokwe akobundu says:

pls can you help out with this question
an experiment consists of two factors,A and B ,each at 3 levels
a.write the appropriate ststistical model
b.specify the appropriate hypothesis to be tested
c.give a skeletal Anova for presenting results of the analysis of data fro m the experiment

• Charles says:

You need to provide additional information to get a definitive answer, but assuming that you are looking for a two fixed factor ANOVA model with replication, please see the following webpage>
Two Factor ANOVA with Replication
Charles

• igbokwe akobundu says:

sir please help me out wt the above question i have battling to solve it preparing for en exam it might likely be an exam question thank you

14. samantha says:

In figure 3, I understand everything except the computation necessary to find the P-Value. What did you do to find that number?

• Charles says:

Samantha,
The p-value for any factor is given by the formula =FDIST(F,df,dfE,True).
Charles

• Jinson Alex says:

Hi Charles,

thank you the calculations. they are really helpful.

I am unable to find how to calculate the F value and P value as the figure 3 does not show the formulas.

Can you help?

• Charles says:

As always F for any factor is equal to MS for that factor divided by MS for the error term. E.g. for factor A, F is MSA/MSW. The p-value is FDIST(F,df1,df2), where df1 is the degrees of freedom for that factor and df2 is the degrees of freedom for the error term.
Charles

15. Srikant Potluri says:

Dear Dr Charles
This is an excellent tutorial.
I want calculate ANOVA for the following data.
The data provided is the gray rational grade values for input parameters 4 for 3 levels
PARAMETER LEVEL-1 LEVEL-2 LEVEL-3
VOLTAGE V 0.450339471 0.634585192 0.71200671
PULSE OFF 0.617898144 0.557872095 0.621161134
PULSE ON 0.607522282 0.487965309 0.701443781
CURRENT 0.501263495 0.665427997 0.630239881
The total DF value is equal to 8.
Thank You

• Charles says:

Dear Srikant,
The website explains how to address these sorts of problems. The Real Statistics software makes it easy for you to do so. I am afraid it is up to you to do the rest.
Charles

16. Chelsea says:

Hi Charles,
Thanks for the detailed explanations and for the extremely helpful website. I only took an introductory stats class quite some time ago and I was only taught the one-way ANOVA, so please excuse my ignorance on this matter. I’m wondering if we can eliminate some factors based on ANOVA analysis on limited preliminary data for a system involving many possible factors. As an example, I’ll use a case with 2 factors. Please bear with me and my lengthy questions.

Say we are investigating the effect of 2 factors, A and B, on a dependent variable. However, there is no control over the values of these 2 factors. For example, factors are the waiting time for a student before giving a presentation and the length of the presentation time and the dependent variable is the grade they received.

Two questions:
1/ We have too much variations for the values of these factors. Say, none of them are the same (10, 15, 17, 12, etc). Do we lump the values together and make them into categorical – e.g., low, mid, high (or even numerical based on their average)? Would this introduce large errors in the calculation?
2/ If the data that we obtained do not actually “fill” the table completely, could we still calculate the sum of squares between these factors as if they are 2-way ANOVA? For example, we only have data for:
a) Students who have waited for a “short” time and presented either a ” mid-length” or a “long” presentation
b) Students who have waiting for a “mid-length” time and presented either a “short” or a “mid-length” presentation
c) Students who have waiting for a “long” time and presented either a “short” or a “long” presentation

Or is there an alternative statistical test in order to investigate whether these factors affect the scores at all?

Would greatly appreciate your advice. Thank you!

• Charles says:

Chelsea,
I only partially understand the situation you are describing, but, in any case, here are a couple of observations:
1. To use ANOVA, the independent variables need to be categorical. If they aren’t then by necessity you need to lump some of them together.
2. If the data doesn’t completely fill the table (or if you have an unequal number of sample elements in the cells of the table), then you have an unbalanced model. You can still analyze such models using ANOVA (although under the covers the analysis is regression). You can learn more about this at the webpage: Unbalanced ANOVA.
Charles

• Chelsea says:

Thank you for your answer, Charles. Very much appreciated.

I am thinking along the line of how to identify which factors in experiments affect the result and which don’t (whether or not there is a correlation between each of these factors and the result). Problem is these factors aren’t controllable, thus the effect of each factor cannot be isolated from the others. Sorry for not expressing myself clearly. I really gotta do more reading on various stats method.

Thanks again! Your website has been a great help!

17. Rasool says:

Hi Friends ,
Can you anyone tell me how we can observe the distribution by looking through existing data

• Charles says:

Rasool,
Sorry, but what do you mean_
Charles

18. Mat says:

hello Dr. Charles i want to know about the 4 factor anova ? how to design this ? what is mean by 2^k factorial design ?

• Charles says:

Mat,
The approach to 4 factor Anova is similar to 3 factor Anova, excepty that it is more complicated and difficult to interpret since now you have the factors A, B, C, D, AxB, AxC, AxD, BxC, BxD, CxD, AxBxC, AxBxD, AxCxD, BxCxD and AxBxCxD.
A 2^k factorial design has k factors, where each factor has two levels.
Charles

19. Ronald Patrick Pascual says:

Hello Dr. Charles!

Can you please give me a copy of the excel file =(
I really wanted to study it on excel, especially the last picture (construction of ANOVA table)

Thanks!

• Charles says:

Ronald,
You can download any of the examples by going to Workbook Examples.
Charles

20. Ronald Patrick Pascual says:

Hi Sir Charles!

I have my thesis that works like this:

FACTORS
A = Concentration: 3 levels
B = Time: 6 levels (7days, 6days, 5days for 25 deg C) (5, 10 and 15 minutes for 100 degC)
C =Temperature: 25degC and 100 degC (2 levels)

The problem is when I manually calculate the three way anova of this, there will be no intersection of B and C at certain points; that is, when the temp. is 25 the intersection to time is only 7, 6 and 5 days and when the temp. is 100, the intersection to time is only 5, 10 and 15 minutes. It makes the value of B x C negative and ruins the whole ANOVA table (no values for p-value can be obtained)

I also tried using the Real Statistics Data Analysis Tool on my Excel and yielded the same results. My question is: is the three way anova applicable to my case? Is there any more statistical treatment that I can use to find out which of the factors influences the variable on my thesis. I badly need you help sir! Thank you very much

• Charles says:

Ronald,
If you send me an Excel file with your data, I will try to provide a suggestion. You can find my email address at Contact Us.
Charles

21. Garapati Prashanth says:

the programe shows the follwoing error: Alpha must be a number between 0 and .5
I selected 0.05 but even it shows the same error

• Charles says:

Garapati,
Which data analysis tool were you using?
In the meantime, I suggest that you enter the value 0 for Alpha and then change its value on the output report.
Charles

22. edu says:

Hello.. I just want to ask a help or a an advise if it is possible to conduct a three way ANOVA without replication?

23. K. Umadevi says:

sir, your site is extremely useful for researchers like me who had poor knowledge in statistics. but I have some more guidance in feeding the data. Kindly help me. I have collected the no. of egg ribbons of a molluscan organism in two different sites, from three tidal levels ( sub sites ) in each site for 24 months in 25 cm2 area. Prof Hodgson from South Africa had done the same work earlier and performed 3-factor nested ANOVA keeping time and site as fixed factors and sub-sites as random factor. My problem is following Your figure1 in example 1, which data I should enter as A,B,C columns of excel sheet, ofcourse I will enter the no. egg ribbons from col. D onwards. please help me to enter the data following Hodgson’s fixed and random factors.

• Charles says:

If I understand correctly site as a fixed factor and sub-sites nested in site. Since you say this is a random factor, I understand that there are more than 3 possible tidal sub-sites, with 3 chosen at random. Is this correct?
Regarding time, it sounds like you take multiple readings at different points in time. Is this correct? If so, then Time is a repeated measures factor.
If I have captured the situation correctly, then the Real Statistics software doesn’t quite support this case.
Charles

24. John says:

Hi Charles,
thanks for all the brilliant explanations and the excel add-on which are really saving me hours of work.
I’ve run a 3 way anova recently (operators, days, batches) and I get the same table from your figure 3 on this page but how do I then go on to calculate the reproducibility and repeatability in the same way that it is done on the 2 way anova?
Thanks
John

• Charles says:

John,
There are methods for adding a third factor, but this is beyond what is currently supported by Real Statistics.
Charles

DEAR Charles
I have a situation where not sure how to deal, and maybe you can suggest something.
I have three factors 1: climate with three levels, 2. Cultivars with two levels and 3. Irrigation with two levels. I have physiological measurements from plants on two different occasions (lets say day 1 and day 3). I want to know if the measurements done on day 1 were statistically different from day 3. Can I include time (measurement time with two levels viz. day 1 and day 3) as a fourth factor to perform a 4-way ANOVA? I can not do ANOVA with repeated measures because measurements on day 1 and day 3 were not exactly done on same plants/leaves but of course from the same group of plants.

Thanks

• Charles says:

With more than three factors it is very difficult to interpret the results. I suggest that you create separate models with a maximum of three factors, especially if you don’t need to compare all the factors with each other.
I am not sure how to deal with the following issue: “I can not do ANOVA with repeated measures because measurements on day 1 and day 3 were not exactly done on same plants/leaves but of course from the same group of plants.” Perhaps nested ANOVA or some other ANOVA approach would work, but this would probably depends on some of the details of your situation. If the same group of plants share essential characteristics, then perhaps even repeated measures ANOVA would be appropriate. How this is handled may also depend on how others in your field have handled such situations in the past.
Charles

26. kuldeep agrawal says:

sir, i am trying to develop a model which can group the levels of factors from severe to moderate to low. 3 factors(rpm, load, ambient humidity) are there each with 3 levels.output(response) is failure rate of bearings. the combination of factors with different levels is said to be severe then other combination of levels for factors if failure rate for earlier one is greater than second combination.
sir, i want to know which statistical method should i use to model it and test the hypothesis.
My problems falls in category(multi factor ANOVA) or not whether i should use multi regression model or not.sir, i am relatively new in statistics field your response will be highly important and beneficial to solve and approach this problem statistically correct.

• Charles says:

What test to use really depends on what hypothesis you want to test. What do you want to test?
Charles

• kuldeep agrawal says:

sir ,
i want to test that whether the degradation rate for mechanical bearing is greater for level combination A (LA,LA,LA) than level combination B (LB, LB,LB) for three factors or is it less.

• Charles says:

Kuldeep,
Sorry, but I don’t have enough information to be able to provide a suggestion as to which test to use.
Charles

27. Janine says:

Good day Sir,

Thank you so much for your add-in, this has made my computations easier.
I just have a question regarding negative sum of squares for two-way interactions. The value of SS for AB interaction in my results turn out to be negative, so that the p-value cannot be computed. May I know if this is possible?

Thanks in advance sir and have a nice day.

• Charles says:

Janine,
The sum of squares should never be negative. If you send me an Excel file with your data and calculations, I will try to figure out what the problem is. You can find my email address at Contact us.
Charles

• Janine says:

Good day Dr. Charles

I have passed my data using my academic email. Thank you in advance and have a nice day!

28. Jabir says:

Hi Charles,

I’m wondering if you could help me determine what statistical analysis I should use for the following example. Please forgive me if my explanation isn’t clear – I’m new to this!

I’m studying seizure spread from one brain site (seizure focus) to several others (propagation sites), for the purposes of understanding why some seizures impair consciousness and others do not. For this experiment, I have three seizure foci. This is the independent factor. Subjects are grouped based on their seizure foci. For each subject, I’m recording from five sites different sites. These recording/propagation sites are the within-subjects factor. I record from the same five sites for each of the seizure foci. Recording takes place over the course of 7 days. I record from the propagation sites each day, for 7 days. The dependent variable is seizure duration.

In summary, there are three factors: seizure focus (independent), propagation/recording site (within-subject factor), and recording day.

Based on the data (which I can provide to you), I’d like to determine whether there is a main effect for 1) seizure focus, 2) propagation/recording site, and 3) recording day. I’d also like to study interactions between the three factors. What statistical test would be appropriate for this?

Jabir

29. Ariane says:

Hello Charles,

I was wondering if you could help me determine what is the best statistical analysis for my work.

I am studying the effect of treatment A (at 3 different concentration), treatment B (at 2 different concentration) and the combination of treatment A and treatment B on gene expression. So I am looking at the individual effect of both treatment and comparing if the combination of A + B at lower concentration induces the desired therapeutic effect of A at the highest concentration. For exemple I have group 1 (A at 50 µM), group 2 (A at 250 µM), group 3 (A at 500 µM), group 4 (B at 25 µM), group 5 (B at 50 µM), group 6 (A at 50 µM and B 25 µM), group 7 (A at 250 µM and B at 25 µM), group 8 (A at 500 µM and B at 25 µM), and so on with a control group. Lets say the desired therapeutic effect we want is with A-500 µM and we want to lower the dose with the addition of molecule B. We want to see if treatment A-500 µM is equivalent to treatment A 250µM + B-25µM or B-50µM. Would it be a two way anova ? Is it with repeated measure in each treatment group I have 4 replicates?

Thank you for your input.

• Charles says:

Ariane,
If I understand correctly, you have 8 treatment groups (perhaps more) plus a control group. I presume that no subject is more than one group (in which case you don’t have a repeated measures model – repeated measures is not the same as a model with replications).
One way to view this is as two factor Anova with factors A and B. The levels for A are 0, 50, 250, 500 (note that I added a zero level) and the levels for B are 0, 25, 50 (once again adding a zero level). This should work provided all the possible interactions between A and B levels are modelled (I am not sure whether this is true).
Checking whether treatment A-500 µM is equivalent to treatment A 250µM + B-25µM or B-50µM can be done via contrasts in the follow-up analysis. Of course, if this is all you want to test, then you could simply create three groups with just these treatments and use one-way ANOVA.
Charles

• Ariane says:

Hello Charles, thank you for the reply.

Would an anova with repeated mesure be if I did the same experiment 3 times and wanted to combine them for the analysis ?

• Charles says:

Ariane,
This depends on the details. Since you are combining the 3 measurements, probably you wouldn’t need to use the repeated measures version of ANOVA.
Charles

30. Ronald B. Jamora says:

Hi Sir!
I am currently working on my research regarding the effect of the three parameters on the degradation percentage using photocatalytic process.

This is how it goes.
I have a three variables: Concentration(8 ppm and 12 ppm), Catalyst Loadings(500mg and 1000mg) and Time(1hr and 2hr). The sample was obtained in triplicate.
I am to determine the significance of the three parameters on the degradation and to know the interaction of the variables

Sir, I am new at doing this statistics analysis and I don’t know how I am going to be presenting my data. Moreover, can you tell me if I can use SPPS, Minitab or Excel on analyzing my data? I am so confused at the moment. Sir, I am so in need of your help. I hope you can teach me about this. Any response from you will be greatly appreciated. Thank you Sir!

Ronald

• Charles says:

Ronald,
You can address this type of analysis using the Real Statistics Three Factor ANOVA data analysis tool. See
Three Factor ANOVA
I don’t use SPSS and Mintab, but I am sure that these tools also support this type of analysis.
Charles

31. Saad Khan says:

Dear Charles,
I’m currently working on my thesis on pasteurization of 2 different types of milk(goat and cow) using 8 different bacteria. The purpose is to see how well the bacteria can grow in these different temperatures.
I’m wondering if you could help me determine which statistical analysis I should use. Please forgive me if my explanation isn’t clear – I’m new to this and haven’t had much experience using statistics!
As data, i have, temperature and pH with 2000 data points.
I have done experiments on 4 different temperatures(0,30,75,80) and done repeats of these.
I have calculated the time and value of max slope it takes for the pH to start drop below 6,2 (when the milk starts to coagulate).
My question is, how can I best describe the differences and I’m also required to show this graphical, is it possible?, if so which type and what should be on the different axis?

Hope you can help..
Best Regards

• Charles says:

It really depends on what hypothesis or hypotheses you want to test and some of the details of the scenario you described. From your description, I see that you have a Milk factor (goat, cow), a Bacteria factor (8 types) and a Temperature factor (0, 30, 75, 80). The usual approach is three factor ANOVA, but this is only necessary if you are interested in the interactions between all the factors (otherwise you might be able to simplify things). What is not clear are the Subjects being analyzed. Are these 2,000 different batches of milk subject to various combinations of the three factors (there are 2 x 8 x 4 = 64 such combinations). If some of the batches of mik are subject to multiple combinations of temperature and/or bacteria then a repeated measures version of ANOVA would be required.
Charles

• Saad Khan says:

Hi Charles,
the hypothesis is to test if the bacterias can grow in milk that has been pasteurized at different temperature. The temperatures are the pasteurized milk temperatures. All of the tests have been done on 40 Degree Celcius(irrelevant at this point). My bad, what I meant is that I have 2000 data points in the form of measures so n=2000 observations for pH, Temperature. I have calculated the time it takes for each bacteria to coagulate from a certain pH till finish and got slope values and time. I want to somehow show if there is a significant difference in the time it takes. After doing some reading I also got to three-way ANOVA. One thing I was thinking is that I managed to do an ANOVA test, with getting the different p-value. But how can I explain my results with graphs? Should I plot the p-value in some way?.
Also what type of tests should I do for the repeats?
hope you can help me.
Best Regards

• Charles says:

My key question to you is what are the subjects you are measuring? batches of milk? bacteria? I would to know if each subject is independent of the other.
What do you mean by the “repeats”? Are you measuring the same subject multiple times? If so, what exactly are you doing?
You can graph the p-values, but it might more sense to graph the time coagulate.
Charles

• Saad Khan says:

Hi Charles, sorry for the late response the deadline came for my thesis and i tried my best with a anova test. my factors are, 1. type of milk(goat,cow). bacterias(no 1 bacteria, no 2 bacteria etc. til the 8. bacteria)., and third would be pasteurization temperatures. The repeats are duplicates. So lets say i have a test for 0 degrees pasteurized milk, with the 8 bacterias. after i have done this test in 24 hour. I will do an exactly same test again to strengthen the data(by which I have absolutely no idea how to interpret this)I was wondering if you have any experience with statistics software like Graphprism or R-studio?
Best Regards